MolNFT v1 · #34838 · protein

Mutant N33D structure of phenylacetic acid degradation protein paai from thermus thermophilus HB8

2DSL: “Mutant N33D structure of phenylacetic acid degradation protein paai from thermus thermophilus HB8”. X-ray diffraction, 2 ligands (MG, CL). MolNFT v1 #34838 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2DSL
Type: protein
Length: 230 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phenylacetic acid degradation protein paai
UniProt: Q5SJP3
Ligands: MG, CL

Structure

x-ray diffraction · 1 distinct chain · 22% helix, 50% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Phenylacetic acid degradation protein paai	protein	115	22% helix, 50% strand	Q5SJP3

Ligands and binding sites

MG · Magnesium ion · metal · chains A
CL · Chloride ion · ion · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 640 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

2DSL · Mutant N33D structure of phenylacetic acid degradation protein PaaI from Thermus… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5SJP3
Elsewhere: RCSB PDB 2DSL · PDBe 2DSL · UniProt Q5SJP3

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