MolNFT v1 · #34392 · protein
Solution structure of the ubiquitin-associated domain of human bmsc- ubp and its complex with ubiquitin
2DEN · Immunoglobulin G-binding protein G,UBIQUITIN-like protein 7: “Solution structure of the ubiquitin-associated domain of human bmsc- ubp and its complex with ubiquitin”. Solution nmr. MolNFT v1 #34392 on GenesisL1: 3D structure…
- PDB
- 2DEN
- Type
- protein
- Length
- 122 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Immunoglobulin G-binding protein G,UBIQUITIN-like protein 7; Polyubiquitin-B
- UniProt
- P06654, Q96S82, J3QS39
Structure
solution nmr · 2 distinct chains · 39% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Immunoglobulin G-binding protein G,UBIQUITIN-like protein 7 | protein | 46 | 70% helix, 0% strand | P06654, Q96S82 |
| B | Polyubiquitin-B | protein | 76 | 20% helix, 34% strand | J3QS39 |
Interfaces
1 interface between chains.
- A–B · 817 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 2DEN · Solution Structure of the Ubiquitin-Associated Domain of Human BMSC-UbP and its Complex… · the same entry in another collection · chain A against A, TM-score 1.00
- Q96S82 · AlphaFold monomer V2.0 prediction for ubiquitin-like protein 7 (Q96S82) · a predicted model of the same protein · chain A against A, TM-score 0.82
- P06654 · AlphaFold monomer V2.0 prediction for immunoglobulin G-binding protein G (P06654) · a predicted model of the same protein · chain A against A, TM-score 0.43
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06654
- Every structure of UniProt Q96S82
- Every structure of UniProt J3QS39
- Elsewhere: RCSB PDB 2DEN · PDBe 2DEN · UniProt P06654 · UniProt Q96S82 · UniProt J3QS39
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