MolNFT v1 · #34279 · protein

Solution structures of the FN3 domain of human tripartite motif protein 9

2DB8 · Tripartite motif protein 9, isoform 2: “Solution structures of the FN3 domain of human tripartite motif protein 9”. Solution nmr, 1 pocket (best druggability 0.51). MolNFT v1 #34279 on GenesisL1: 3D structure, binding sites and…

PDB: 2DB8
Type: protein
Length: 110 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Tripartite motif protein 9, isoform 2
UniProt: Q9C026
Pockets: 1 · best druggability 0.51

Structure

solution nmr · 1 distinct chain · 0% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Tripartite motif protein 9, isoform 2	protein	110	0% helix, 29% strand	Q9C026

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	112	0.51	0.81	21	empty

Compared structures

2DB8 · Solution structures of the fn3 domain of human Tripartite motif protein 9 · the same entry in another collection · chain A against A, TM-score 1.00
Q9C026 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase TRIM9 (Q9C026) · a predicted model of the same protein · chain A against A, TM-score 0.81

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9C026
Elsewhere: RCSB PDB 2DB8 · PDBe 2DB8 · UniProt Q9C026

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