MolNFT v1 · #33849 · protein
Crystal structure of a pua domain (APE0525) from the aeropyrum pernix K1 (sulfate complex)
2CX0 · Hypothetical protein APE0525: “Crystal structure of a pua domain (APE0525) from the aeropyrum pernix K1 (sulfate complex)”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.36). MolNFT v1 #33849 on GenesisL1: 3D…
- PDB
- 2CX0
- Type
- protein
- Length
- 184 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein APE0525
- UniProt
- Q9YEQ6
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein APE0525 | protein | 184 | 27% helix, 39% strand | Q9YEQ6 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 71 | 0.36 | 0.77 | 14 | empty |
| 2 | 51 | 0.24 | 0.72 | 15 | empty |
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 2CX0 · Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9YEQ6
- Elsewhere: RCSB PDB 2CX0 · PDBe 2CX0 · UniProt Q9YEQ6
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