MolNFT v1 · #33626 · protein
Solution structure of the RNA recognition motif in RNA-binding region containing protein 1
2CQD: “Solution structure of the RNA recognition motif in RNA-binding region containing protein 1”. Solution nmr, 1 pocket (best druggability 0.27). MolNFT v1 #33626 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2CQD
- Type
- protein
- Length
- 116 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA-binding region containing protein 1
- UniProt
- Q9H0Z9
- Pockets
- 1 · best druggability 0.27
Structure
solution nmr · 1 distinct chain · 15% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA-binding region containing protein 1 | protein | 116 | 15% helix, 22% strand | Q9H0Z9 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 60 | 0.27 | 0.73 | 14 | empty |
Compared structures
- 2CQD · Solution Structure of the RNA recognition motif in RNA-binding region containing protein 1 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9H0Z9 · AlphaFold monomer V2.0 prediction for RNA-binding protein 38 (Q9H0Z9) · a predicted model of the same protein · chain A against A, TM-score 0.68
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H0Z9
- Elsewhere: RCSB PDB 2CQD · PDBe 2CQD · UniProt Q9H0Z9
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