MolNFT v1 · #33202 · RNA

Refinement of RNase P P4 stemloop structure using residual dipolar coupling data - C70U mutant

2CD3 · 5'-R(*GP*GP*AP*AP*GP*UP*UP*CP*GP*GP…: “Refinement of RNase P P4 stemloop structure using residual dipolar coupling data - C70U mutant”. Solution nmr, 1 pocket (best druggability 0.31). MolNFT v1 #33202 on GenesisL1: 3D structure…

PDB: 2CD3
Type: RNA
Length: 27 nucleotides
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-R(*GP*GP*AP*AP*GP*UP*UP*CP*GP*GP *UP*CP*UP*UP*CP*GP*GP*AP*CP*CP*GP*GP*CP*UP*UP*CP*C)-3'
Pockets: 1 · best druggability 0.31

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	5'-R(GPGPAPAPGPUPUPCPGPGP UPCPUPUPCPGPGPAPCPCPGPGPCPUPUPCP*C)-3'	rna	27	—	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	100	0.31	0.72	13	empty

Compared structures

2CD3 · Refinement of RNase P P4 stemloop structure using residual dipolar coupling data - C70U… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2CD3 · PDBe 2CD3

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