MolNFT v1 · #33199 · protein

Structure of human lambda-6 light chain dimer wil

2CD0 · Protein (bence-jones protein wil, a variable domain from…: “Structure of human lambda-6 light chain dimer wil”. X-ray diffraction, 1 pocket (best druggability 0.25). MolNFT v1 #33199 on GenesisL1: 3D structure, binding sites and…

PDB: 2CD0
Type: protein
Length: 222 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (bence-jones protein wil, a variable domain from lambda-6 type immunoglobulin…
Pockets: 1 · best druggability 0.25

Structure

x-ray diffraction · 1 distinct chain · 3% helix, 50% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Protein (bence-jones protein wil, a variable domain from lambda-6 type immunoglobulin light chain)	protein	111	3% helix, 50% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.25	0.72	16	empty

Interfaces

1 interface between chains.

A–B · 708 Å² buried · 14 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

2CD0 · Structure of human lambda-6 light chain dimer wil · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2CD0 · PDBe 2CD0

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