MolNFT v1 · #33157 · protein

Cellular retinoic acid binding protein I in complex with a retinobenzoic acid (AM80)

2CBR · Protein (crabp-I): “Cellular retinoic acid binding protein I in complex with a retinobenzoic acid (AM80)”. X-ray diffraction, 1 ligand (A80), 1 pocket (best druggability 0.77). MolNFT v1 #33157 on GenesisL1: 3D structure, binding…

PDB: 2CBR
Type: protein
Length: 136 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (crabp-I)
UniProt: P62964
Ligands: A80
Pockets: 1 · best druggability 0.77

Structure

x-ray diffraction · 1 distinct chain · 14% helix, 57% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (crabp-I)	protein	136	14% helix, 57% strand	P62964

Ligands and binding sites

A80 · 4-[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbamoyl]benzoic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	271	0.77	0.89	41	A80

Compared structures

2CBR · Cellular retinoic acid binding protein I in complex with a retinobenzoic acid (AM80) · the same entry in another collection · chain A against A, TM-score 1.00
P62964 · AlphaFold monomer V2.0 prediction for cellular retinoic acid-binding protein 1 (P62964) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P62964
Elsewhere: RCSB PDB 2CBR · PDBe 2CBR · UniProt P62964

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