MolNFT v1 · #33039 · protein

X-ray structure of the N and C-terminal domain of coronavirus nucleocapsid protein.

2C86: “X-ray structure of the N and C-terminal domain of coronavirus nucleocapsid protein.”. X-ray diffraction, 1 pocket (best druggability 0.52). MolNFT v1 #33039 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2C86
Type: protein
Length: 268 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Nucleocapsid protein
UniProt: P69598
Pockets: 1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Nucleocapsid protein	protein	134	2% helix, 24% strand	P69598

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	160	0.52	0.80	41	empty

Interfaces

1 interface between chains.

A–B · 474 Å² buried · 1 hydrogen bond · protein-protein

Compared structures

2C86 · x-ray structure of the N and C-terminal domain of coronavirus nucleocapsid protein. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P69598
Elsewhere: RCSB PDB 2C86 · PDBe 2C86 · UniProt P69598

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