MolNFT v1 · #32990 · protein
Fe-soaked crystal structure of the DPS92 from deinococcus radiodurans
2C6R · DNA-binding stress response protein, dps family: “Fe-soaked crystal structure of the DPS92 from deinococcus radiodurans”. X-ray diffraction, 2 ligands (FE, CL), 1 pocket (best druggability 0.38). MolNFT v1 #32990 on GenesisL1: 3D…
- PDB
- 2C6R
- Type
- protein
- Length
- 165 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA-binding stress response protein, dps family
- UniProt
- Q9RZN1
- Ligands
- FE, CL
- Pockets
- 1 · best druggability 0.38
Structure
x-ray diffraction · 1 distinct chain · 72% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding stress response protein, dps family | protein | 165 | 72% helix, 2% strand | Q9RZN1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.38 | 0.78 | 20 | empty |
Compared structures
- 2C6R · Fe-soaked crystal structure of the DPS92 from deinococcus radiodurans · the same entry in another collection · chain A against A, TM-score 1.00
- Q9RZN1 · AlphaFold monomer V2.0 prediction for DNA protection during starvation protein 2 (Q9RZN1) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RZN1
- Elsewhere: RCSB PDB 2C6R · PDBe 2C6R · UniProt Q9RZN1
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