MolNFT v1 · #32858 · protein

Dps from deinococcus radiodurans

2C2U · DNA-binding stress response protein: “Dps from deinococcus radiodurans”. X-ray diffraction, 3 ligands (ZN, FE, SO4). MolNFT v1 #32858 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2C2U
Type: protein
Length: 178 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA-binding stress response protein
UniProt: Q9RS64
Ligands: ZN, FE, SO4

Structure

x-ray diffraction · 1 distinct chain · 68% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DNA-binding stress response protein	protein	178	68% helix, 1% strand	Q9RS64

Ligands and binding sites

ZN · Zinc ion · metal · chains A
FE · Fe (III) ion · metal · chains A
SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

2C2U · Dps from Deinococcus radiodurans · the same entry in another collection · chain A against A, TM-score 1.00
Q9RS64 · AlphaFold monomer V2.0 prediction for DNA protection during starvation protein 1 (Q9RS64) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9RS64
Elsewhere: RCSB PDB 2C2U · PDBe 2C2U · UniProt Q9RS64

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