MolNFT v1 · #32666 · protein
Human serum albumin complexed with 3-carboxy-4-methyl-5- propyl-2-furanpropanoic acid (cmpf)
2BXA: “Human serum albumin complexed with 3-carboxy-4-methyl-5- propyl-2-furanpropanoic acid (cmpf)”. X-ray diffraction, 1 ligand (C1F), 20 pockets (best druggability 0.83). MolNFT v1 #32666 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2BXA
- Type
- protein
- Length
- 1,135 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Serum albumin
- UniProt
- P02768
- Ligands
- C1F
- Pockets
- 20 · best druggability 0.83
Structure
x-ray diffraction · 2 distinct chains · 73% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serum albumin | protein | 569 | 74% helix, 0% strand | P02768 |
| B | Serum albumin | protein | 566 | 72% helix, 0% strand | P02768 |
Ligands and binding sites
- C1F · 3-carboxy-4-methyl-5-propyl-2-furanpropionic · ligand · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
20 pockets found on a 1 Å grid, 13 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 700 | 0.83 | 0.87 | 76 | C1F |
| 2 | 1089 | 0.82 | 0.83 | 95 | C1F |
| 3 | 147 | 0.70 | 0.89 | 23 | C1F |
| 4 | 128 | 0.69 | 0.90 | 20 | C1F |
| 5 | 54 | 0.67 | 0.95 | 18 | empty |
Modifications
Observed in the structure: 34 disulfide (disulfide).
Compared structures
- 2BXA · Human serum albumin complexed with 3-carboxy-4-methyl-5-propyl-2- furanpropanoic acid… · the same entry in another collection · chain A against A, TM-score 1.00
- P02768 · AlphaFold monomer V2.0 prediction for albumin (P02768) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02768
- Elsewhere: RCSB PDB 2BXA · PDBe 2BXA · UniProt P02768
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.