MolNFT v1 · #32601 · protein
The C-terminal domain from micronemal protein 1 (MIC1) from toxoplasma gondii
2BVB: “The C-terminal domain from micronemal protein 1 (MIC1) from toxoplasma gondii”. Solution nmr, 1 pocket (best druggability 0.71). MolNFT v1 #32601 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2BVB
- Type
- protein
- Length
- 137 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Micronemal protein 1
- UniProt
- O00834
- Pockets
- 1 · best druggability 0.71
Structure
solution nmr · 1 distinct chain · 0% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Micronemal protein 1 | protein | 137 | 0% helix, 53% strand | O00834 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 87 | 0.71 | 0.93 | 30 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2BVB · The C-terminal domain from Micronemal Protein 1 (MIC1) from Toxoplasma Gondii · the same entry in another collection · chain A against A, TM-score 1.00
- O00834 · AlphaFold monomer V2.0 prediction for micronemal protein 1 (O00834) · a predicted model of the same protein · chain A against A, TM-score 0.81
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00834
- Elsewhere: RCSB PDB 2BVB · PDBe 2BVB · UniProt O00834
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