MolNFT v1 · #32415 · protein

Ubiquitin-like protein yukd of bacillus subtilis

2BPS · Yukd protein: “Ubiquitin-like protein yukd of bacillus subtilis”. X-ray diffraction. MolNFT v1 #32415 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2BPS
Type: protein
Length: 162 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Yukd protein
UniProt: P71071

Structure

x-ray diffraction · 1 distinct chain · 19% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Yukd protein	protein	81	19% helix, 35% strand	P71071

Interfaces

1 interface between chains.

A–B · 680 Å² buried · 6 hydrogen bonds · protein-protein

Compared structures

2BPS · Ubiquitin-like protein YukD of Bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
P71071 · AlphaFold monomer V2.0 prediction for esx secretion system protein yukd (P71071) · a predicted model of the same protein · chain A against A, TM-score 0.93

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P71071
Elsewhere: RCSB PDB 2BPS · PDBe 2BPS · UniProt P71071

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.