MolNFT v1 · #32218 · protein
Crystal structure of the organic hydroperoxide resistance protein ohrb of bacillus subtilis
2BJO: “Crystal structure of the organic hydroperoxide resistance protein ohrb of bacillus subtilis”. X-ray diffraction, 3 pockets (best druggability 0.62). MolNFT v1 #32218 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2BJO
- Type
- protein
- Length
- 270 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Organic hydroperoxide resistance protein ohrb
- UniProt
- P80242
- Pockets
- 3 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Organic hydroperoxide resistance protein ohrb | protein | 135 | 33% helix, 32% strand | P80242 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 168 | 0.62 | 0.84 | 22 | empty |
| 2 | 62 | 0.39 | 0.80 | 14 | empty |
| 3 | 61 | 0.30 | 0.75 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 2853 Ų buried · 46 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 2BJO · Crystal Structure of the Organic Hydroperoxide Resistance Protein OhrB of Bacillus… · the same entry in another collection · chain A against A, TM-score 1.00
- P80242 · AlphaFold monomer V2.0 prediction for organic hydroperoxide resistance protein ohrb… · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80242
- Elsewhere: RCSB PDB 2BJO · PDBe 2BJO · UniProt P80242
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