MolNFT v1 · #32144 · protein
Murine ino synthase with coumarin inhibitor
2BHJ · Nitric oxide synthase: “Murine ino synthase with coumarin inhibitor”. X-ray diffraction, 3 ligands (FC1, HEM, HBI), 5 pockets (best druggability 0.81). MolNFT v1 #32144 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 2BHJ
- Type
- protein
- Length
- 414 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nitric oxide synthase
- EC
- 1.14.13.39
- UniProt
- P29477
- Ligands
- FC1, HEM, HBI
- Pockets
- 5 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nitric oxide synthase (EC 1.14.13.39) | protein | 414 | 39% helix, 12% strand | P29477 |
Ligands and binding sites
- FC1 · Thiocoumarin · ligand · chains A
- HEM · Protoporphyrin IX containing Fe · ligand · chains A
- HBI · 7,8-dihydrobiopterin · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1163 | 0.81 | 0.82 | 70 | FC1, HEM, HBI |
| 2 | 64 | 0.52 | 0.86 | 20 | empty |
| 3 | 71 | 0.31 | 0.74 | 14 | empty |
| 4 | 71 | 0.30 | 0.74 | 19 | empty |
| 5 | 58 | 0.27 | 0.73 | 12 | empty |
Compared structures
- 2BHJ · murine iNO synthase with coumarin inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29477
- Elsewhere: RCSB PDB 2BHJ · PDBe 2BHJ · UniProt P29477
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