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MolNFT v1 · #31989 · protein

Coordinates of the N-terminal domain of ribosomal protein L11,C- terminal domain of ribosomal protein L7/L12 and a portion of the G' domain of elongation factor G, as fitted into cryo-EM MAP of an escherichia COLI 70S*EF-G*GDP*FUSIDIC acid complex

2BCW · 50S ribosomal protein L11: “Coordinates of the N-terminal domain of ribosomal protein L11,C- terminal domain of ribosomal protein L7/L12…”. Electron microscopy. MolNFT v1 #31989 on GenesisL1: 3D structure, binding sites and pockets…

PDB
2BCW
Type
protein
Length
191 residues
Chains
3
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
50S ribosomal protein L11; 50S ribosomal protein L7/L12; Elongation factor G
UniProt
P29395, P0A7K2, P13551

Structure

electron microscopy · 3 distinct chains · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A50S ribosomal protein L11protein650% helix, 0% strandP29395
B50S ribosomal protein L7/L12protein680% helix, 0% strandP0A7K2
CElongation factor Gprotein580% helix, 0% strandP13551

Interfaces

1 interface between chains.

  • A–B · 170 Ų buried · 0 hydrogen bonds · protein-protein

Compared structures

  • 2BCW · Coordinates of the N-terminal domain of ribosomal protein L11,C-terminal domain of… · the same entry in another collection · chain B against B, TM-score 1.00
  • 1OLN · Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA · a predicted model of the same protein · chain A against A, TM-score 1.00
  • 1OLN · Model for thiostrepton antibiotic binding to L11 substrate from 50S ribosomal RNA · a predicted model of the same protein · chain A against A, TM-score 1.00
  • P0A7K2 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L7/L12 (P0A7K2) · a predicted model of the same protein · chain B against A, TM-score 0.95
  • P29395 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L11 (P29395) · a predicted model of the same protein · chain A against A, TM-score 0.88
  • P13551 · AlphaFold monomer V2.0 prediction for elongation factor G (P13551) · a predicted model of the same protein · chain C against A, TM-score 0.60

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