MolNFT v1 · #31942 · protein
X-ray structure of T.MARITIMA cora soluble domain
2BBH · Divalent cation transport-related protein: “X-ray structure of T.MARITIMA cora soluble domain”. X-ray diffraction, 2 ligands (NA, MG), 2 pockets (best druggability 0.42). MolNFT v1 #31942 on GenesisL1: 3D structure, binding sites…
- PDB
- 2BBH
- Type
- protein
- Length
- 223 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Divalent cation transport-related protein
- UniProt
- Q9WZ31
- Ligands
- NA, MG
- Pockets
- 2 · best druggability 0.42
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Divalent cation transport-related protein | protein | 223 | 47% helix, 23% strand | Q9WZ31 |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
- MG · Magnesium ion · metal · chains A
- DMU · Decyl-beta-D-maltopyranoside · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 94 | 0.42 | 0.78 | 16 | empty |
| 2 | 128 | 0.42 | 0.75 | 19 | empty |
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 2BBH · X-ray structure of T.maritima CorA soluble domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q9WZ31 · AlphaFold monomer V2.0 prediction for COBALT/MAGNESIUM transport protein cora (Q9WZ31) · a predicted model of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WZ31
- Elsewhere: RCSB PDB 2BBH · PDBe 2BBH · UniProt Q9WZ31
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