MolNFT v1 · #31875 · protein
Structural analysis of P knowlesi homolog of P falciparum pnp
2B94 · Purine nucleoside phosphorylase: “Structural analysis of P knowlesi homolog of P falciparum pnp”. X-ray diffraction, 1 ligand (THJ), 2 pockets (best druggability 0.40). MolNFT v1 #31875 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2B94
- Type
- protein
- Length
- 242 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Purine nucleoside phosphorylase
- EC
- 2.4.2.1
- Ligands
- THJ
- Pockets
- 2 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Purine nucleoside phosphorylase (EC 2.4.2.1) | protein | 242 | 34% helix, 28% strand | — |
Ligands and binding sites
- THJ · Thiosulfate · ligand · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 93 | 0.40 | 0.77 | 17 | empty |
| 2 | 60 | 0.34 | 0.77 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 2B94 · Structural analysis of P knowlesi homolog of P falciparum PNP · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 2B94 · PDBe 2B94
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