MolNFT v1 · #31675 · protein

Ammonium transporter amt-1 from a. fulgidus (xe)

2B2J: “Ammonium transporter amt-1 from a. fulgidus (xe)”. X-ray diffraction, 1 ligand (XE), 2 pockets (best druggability 0.65). MolNFT v1 #31675 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 2B2J
Type: protein
Length: 391 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ammonium transporter
UniProt: O29285
Ligands: XE
Pockets: 2 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 74% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Ammonium transporter	protein	391	74% helix, 2% strand	O29285

Ligands and binding sites

XE · Xenon · ion · 15 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	311	0.65	0.80	45	XE
2	119	0.41	0.75	20	empty

Compared structures

2B2J · Ammonium Transporter Amt-1 from A. fulgidus (Xe) · the same entry in another collection · chain A against A, TM-score 1.00
O29285 · AlphaFold monomer V2.0 prediction for ammonium transporter AMT1 (O29285) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O29285
Elsewhere: RCSB PDB 2B2J · PDBe 2B2J · UniProt O29285

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