MolNFT v1 · #31431 · protein
Solution structure of hndac : a thioredoxin-like [2FE-2S] ferredoxin involved in the NADP-reducing hydrogenase complex
2AUV · Potential NAD-reducing hydrogenase subunit: “Solution structure of hndac : a thioredoxin-like [2FE-2S] ferredoxin involved in the NADP-reducing…”. Solution nmr, 1 ligand (FES), 1 pocket (best druggability 0.47). MolNFT v1 #31431 on…
- PDB
- 2AUV
- Type
- protein
- Length
- 85 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Potential NAD-reducing hydrogenase subunit
- EC
- 1.12.1.3
- UniProt
- Q46505
- Ligands
- FES
- Pockets
- 1 · best druggability 0.47
Structure
solution nmr · 1 distinct chain · 35% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Potential NAD-reducing hydrogenase subunit (EC 1.12.1.3) | protein | 85 | 35% helix, 8% strand | Q46505 |
Ligands and binding sites
- FES · Fe2/s2 (inorganic) cluster · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 132 | 0.47 | 0.78 | 23 | FES |
Compared structures
- 2AUV · Solution Structure of HndAc : A Thioredoxin-like [2Fe-2S] Ferredoxin Involved in the… · the same entry in another collection · chain A against A, TM-score 1.00
- Q46505 · AlphaFold monomer V2.0 prediction for NADP-reducing hydrogenase subunit hnda (Q46505) · a predicted model of the same protein · chain A against A, TM-score 0.63
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q46505
- Elsewhere: RCSB PDB 2AUV · PDBe 2AUV · UniProt Q46505
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