MolNFT v1 · #31420 · protein
Structure of thermus aquaticus RNA polymerase beta'-subunit insert
2AUJ · DNA-directed RNA polymerase beta' chain: “Structure of thermus aquaticus RNA polymerase beta'-subunit insert”. X-ray diffraction, 2 pockets (best druggability 0.29). MolNFT v1 #31420 on GenesisL1: 3D structure, binding sites and…
- PDB
- 2AUJ
- Type
- protein
- Length
- 298 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA-directed RNA polymerase beta' chain
- EC
- 2.7.7.6
- UniProt
- Q9KWU6
- Pockets
- 2 · best druggability 0.29
Structure
x-ray diffraction · 1 distinct chain · 5% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) | protein | 298 | 5% helix, 52% strand | Q9KWU6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.29 | 0.73 | 19 | empty |
| 2 | 51 | 0.27 | 0.74 | 14 | empty |
Compared structures
- 2AUJ · Structure of Thermus aquaticus RNA polymerase beta'-subunit insert · the same entry in another collection · chain D against D, TM-score 1.00
- Q9KWU6 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q9KWU6) · a predicted model of the same protein · chain D against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KWU6
- Elsewhere: RCSB PDB 2AUJ · PDBe 2AUJ · UniProt Q9KWU6
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