MolNFT v1 · #31344 · protein
Crystal structure of protein of unknown function from pseudomonas aeruginosa
2ARZ · Hypothetical protein PA4388: “Crystal structure of protein of unknown function from pseudomonas aeruginosa”. X-ray diffraction, 1 ligand (CL), 7 pockets (best druggability 0.71). MolNFT v1 #31344 on GenesisL1: 3D structure, binding…
- PDB
- 2ARZ
- Type
- protein
- Length
- 473 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein PA4388
- UniProt
- Q9HW16
- Ligands
- CL
- Pockets
- 7 · best druggability 0.71
Structure
x-ray diffraction · 2 distinct chains · 34% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical protein PA4388 | protein | 238 | 32% helix, 33% strand | Q9HW16 |
| B | Hypothetical protein PA4388 | protein | 235 | 36% helix, 32% strand | Q9HW16 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 370 | 0.71 | 0.83 | 27 | GOL |
| 2 | 231 | 0.65 | 0.83 | 34 | CL |
| 3 | 361 | 0.60 | 0.77 | 39 | empty |
| 4 | 69 | 0.40 | 0.79 | 15 | empty |
| 5 | 65 | 0.37 | 0.78 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 1601 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 2ARZ · Crystal Structure of Protein of Unknown Function from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HW16
- Elsewhere: RCSB PDB 2ARZ · PDBe 2ARZ · UniProt Q9HW16
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