MolNFT v1 · #31084 · protein
X-ray crystal structure of protein VC0467 from vibrio cholerae. northeast structural genomics consortium target VCR8.
2AJ2 · Hypothetical UPF0301 protein VC0467: “X-ray crystal structure of protein VC0467 from vibrio cholerae. northeast structural genomics consortium…”. X-ray diffraction, 1 pocket (best druggability 0.46). MolNFT v1 #31084 on GenesisL1…
- PDB
- 2AJ2
- Type
- protein
- Length
- 187 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical UPF0301 protein VC0467
- UniProt
- Q9KUP8
- Pockets
- 1 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 19% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hypothetical UPF0301 protein VC0467 | protein | 187 | 19% helix, 32% strand | Q9KUP8 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 91 | 0.46 | 0.80 | 20 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 2AJ2 · X-Ray Crystal Structure of Protein VC0467 from Vibrio cholerae. Northeast Structural… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9KUP8 · AlphaFold monomer V2.0 prediction for UPF0301 protein VC_0467 (Q9KUP8) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9KUP8
- Elsewhere: RCSB PDB 2AJ2 · PDBe 2AJ2 · UniProt Q9KUP8
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