MolNFT v1 · #30721 · protein
1.6 ångström resolution structure of the quorum-quenching N-acyl homoserine lactone hydrolase of bacillus thuringiensis
2A7M: “1.6 ångström resolution structure of the quorum-quenching N-acyl homoserine lactone hydrolase of bacillus…”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.62). MolNFT v1 #30721 on GenesisL1: 3D structure, binding…
- PDB
- 2A7M
- Type
- protein
- Length
- 250 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- N-acyl homoserine lactone hydrolase
- EC
- 3.1.1.-
- UniProt
- Q7B8C3
- Ligands
- ZN
- Pockets
- 1 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | N-acyl homoserine lactone hydrolase (EC 3.1.1.-) | protein | 250 | 26% helix, 30% strand | Q7B8C3 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 248 | 0.62 | 0.81 | 34 | GOL |
Compared structures
- 2A7M · 1.6 Angstrom Resolution Structure of the Quorum-Quenching N-Acyl Homoserine Lactone… · the same entry in another collection · chain A against A, TM-score 1.00
- Q7B8C3 · AlphaFold monomer V2.0 prediction for N-acyl homoserine lactonase (Q7B8C3) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7B8C3
- Elsewhere: RCSB PDB 2A7M · PDBe 2A7M · UniProt Q7B8C3
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