MolNFT v1 · #30551 · RNA

Crystal structure of the RNA subunit of ribonuclease P. bacterial a- type.

2A2E · RNA subunit of RNase P: “Crystal structure of the RNA subunit of ribonuclease P. bacterial a- type.”. X-ray diffraction, 1 ligand (OS), 12 pockets (best druggability 0.62). MolNFT v1 #30551 on GenesisL1: 3D structure, binding sites…

PDB: 2A2E
Type: RNA
Length: 266 nucleotides
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA subunit of RNase P
Ligands: OS
Pockets: 12 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	RNA subunit of RNase P	rna	266	—	—

Ligands and binding sites

OS · Osmium ion · metal · 17 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

12 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	491	0.62	0.77	22	OS
2	628	0.61	0.74	29	OS
3	363	0.60	0.78	24	OS
4	463	0.54	0.72	26	empty
5	208	0.48	0.76	16	empty

Compared structures

2A2E · Crystal structure of the RNA subunit of Ribonuclease P. Bacterial A-type. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 2A2E · PDBe 2A2E

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