MolNFT v1 · #30420 · DNA

Crystal structure of the B-DNA decamer D(CGCAATTGCG)2; sequence-dependent crossed helix packing

252D · DNA (5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3'): “Crystal structure of the B-DNA decamer D(CGCAATTGCG)2; sequence-dependent crossed helix packing”. X-ray diffraction. MolNFT v1 #30420 on GenesisL1: 3D structure, binding sites and…

PDB: 252D
Type: DNA
Length: 20 nucleotides
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DNA (5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3')

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	DNA (5'-D(CPGPCPAPAPTPTPGPCPG)-3')	dna	10	—	—

Interfaces

1 interface between chains.

A–B · 465 Å² buried · 35 hydrogen bonds · nucleic-nucleic

Compared structures

252D · Crystal structure of the B-DNA decamer D(CGCAATTGCG)2; sequence-dependent crossed helix… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 252D · PDBe 252D

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