MolNFT v1 · #29918 · protein
Three-dimensional solution structure of a single zinc finger DNA- binding domain
1ZNF · 31ST zinc finger from xfin: “Three-dimensional solution structure of a single zinc finger DNA- binding domain”. Solution nmr, 3 ligands (ACE, ZN, NH2). MolNFT v1 #29918 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1ZNF
- Type
- protein
- Length
- 25 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 31ST zinc finger from xfin
- UniProt
- P08045
- Ligands
- ACE, ZN, NH2
Structure
solution nmr · 1 distinct chain · 40% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 31ST zinc finger from xfin | protein | 25 | 40% helix, 8% strand | P08045 |
Ligands and binding sites
- ACE · Acetyl group · ligand · chains A
- ZN · Zinc ion · metal · chains A
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
- 1ZNF · Three-dimensional solution structure of a single zinc finger DNA-binding domain · the same entry in another collection · chain A against A, TM-score 1.00
- P08045 · AlphaFold monomer V2.0 prediction for zinc finger protein xfin (P08045) · a predicted model of the same protein · chain A against A, TM-score 0.70
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08045
- Elsewhere: RCSB PDB 1ZNF · PDBe 1ZNF · UniProt P08045
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