MolNFT v1 · #29623 · protein

X-ray crystal structure of protein SO4414 from shewanella oneidensis. northeast structural genomics consortium target SOR52.

1ZEE · Hypothetical protein SO4414: “X-ray crystal structure of protein SO4414 from shewanella oneidensis. northeast structural genomics…”. X-ray diffraction, 11 pockets (best druggability 0.79). MolNFT v1 #29623 on GenesisL1: 3D…

PDB: 1ZEE
Type: protein
Length: 726 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein SO4414
UniProt: Q8E972
Pockets: 11 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 64% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein SO4414	protein	363	64% helix, 3% strand	Q8E972

Pockets

11 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1002	0.79	0.81	90	empty
2	568	0.74	0.81	51	empty
3	536	0.74	0.82	49	empty
4	160	0.60	0.83	23	empty
5	179	0.54	0.80	30	empty

Interfaces

1 interface between chains.

A–B · 1455 Å² buried · 21 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 14 modified (engineered).

Compared structures

1ZEE · X-Ray Crystal Structure of Protein SO4414 from Shewanella oneidensis. Northeast… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8E972
Elsewhere: RCSB PDB 1ZEE · PDBe 1ZEE · UniProt Q8E972

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.