MolNFT v1 · #28915 · protein
Crystal structure of the C-terminal domain of E. COLI transcriptional regulator kdgr.
1YSP: “Crystal structure of the C-terminal domain of E. COLI transcriptional regulator kdgr.”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #28915 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1YSP
- Type
- protein
- Length
- 164 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator kdgr
- UniProt
- P76268
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator kdgr | protein | 164 | 42% helix, 24% strand | P76268 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1YSP · Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR. · the same entry in another collection · chain A against A, TM-score 1.00
- P76268 · AlphaFold monomer V2.0 prediction for transcriptional regulator kdgr (P76268) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P76268
- Elsewhere: RCSB PDB 1YSP · PDBe 1YSP · UniProt P76268
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