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MolNFT v1 · #28585 · protein + RNA

Crystal structure of virginiamycin M and S bound to the 50S ribosomal subunit of haloarcula marismortui

1YIT: “Crystal structure of virginiamycin M and S bound to the 50S ribosomal subunit of haloarcula marismortui”. X-ray diffraction. MolNFT v1 #28585 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1YIT
Type
protein + RNA
Length
6,658 residues
Chains
32
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P32410, P22452, P32411, P20276, P12735, P14124, P14135, P12743, P15825, P29198, P22450, P12737, P14123, P12733, P14119, P12734, P10970, P12732, P10972, P14116, P10971, P14121, P18138, P12736

Structure

x-ray diffraction · 32 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
0—rna2754——
1—protein56—P32410
2—protein46—P22452
3—protein92—P32411
8—protein7——
9—rna122——
A—protein237—P20276
B—protein337——
C—protein246—P12735
D—protein140—P14124
E—protein172—P14135
F—protein119—P12743
G—protein29—P15825
H—protein160——
I—protein70——
J—protein142—P29198
K—protein132—P22450
L—protein145—P12737
M—protein194——
N—protein186—P14123
O—protein115—P12733
P—protein143—P14119
Q—protein95—P12734
R—protein150—P10970
S—protein81—P12732
T—protein119—P10972
U—protein53—P14116
V—protein65—P10971
W—protein154—P14121
X—protein82—P18138
Y—protein142—P12736
Z—protein73——

Compared structures

  • 1YIT · Crystal Structure Of Virginiamycin M and S Bound To The 50S Ribosomal Subunit Of… · the same entry in another collection · chain 1 against 1, TM-score 1.00

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