MolNFT v1 · #28359 · protein
Conserved hypothetical protein cth-383 from clostridium thermocellum
1YBX: “Conserved hypothetical protein cth-383 from clostridium thermocellum”. X-ray diffraction, 1 ligand (UNX). MolNFT v1 #28359 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1YBX
- Type
- protein
- Length
- 183 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Conserved hypothetical protein
- Ligands
- UNX
Structure
x-ray diffraction · 2 distinct chains · 61% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Conserved hypothetical protein | protein | 91 | 62% helix, 20% strand | — |
| B | Conserved hypothetical protein | protein | 92 | 61% helix, 20% strand | — |
Ligands and binding sites
- UNX · Unknown atom or ion · ion · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 910 Ų buried · 11 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 1YBX · Conserved hypothetical protein Cth-383 from Clostridium thermocellum · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1YBX · PDBe 1YBX
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