MolNFT v1 · #28296 · protein
Solution structure of archaeon DNA-binding protein SSH10B
1Y9X · DNA/RNA-binding protein alba 1: “Solution structure of archaeon DNA-binding protein SSH10B”. Solution nmr, 2 pockets (best druggability 0.59). MolNFT v1 #28296 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1Y9X
- Type
- protein
- Length
- 194 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA/RNA-binding protein alba 1
- UniProt
- P60848
- Pockets
- 2 · best druggability 0.59
Structure
solution nmr · 1 distinct chain · 28% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA/RNA-binding protein alba 1 | protein | 97 | 28% helix, 36% strand | P60848 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 92 | 0.59 | 0.87 | 15 | empty |
| 2 | 92 | 0.58 | 0.86 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 637 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P60848
- Elsewhere: RCSB PDB 1Y9X · PDBe 1Y9X · UniProt P60848
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