GL1X · GenesisL1 explorer

MolNFT v1 · #27967 · protein

Fusarium solani cutinase complex with DI(ISOPROPYL)PHOSPHATE

1XZK: “Fusarium solani cutinase complex with DI(ISOPROPYL)PHOSPHATE”. X-ray diffraction, 1 ligand (DFP), 1 pocket (best druggability 0.68). MolNFT v1 #27967 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
1XZK
Type
protein
Length
394 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cutinase
EC
3.1.1.-
UniProt
P00590
Ligands
DFP
Pockets
1 · best druggability 0.68

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 16% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BCutinase (EC 3.1.1.-)protein19745% helix, 16% strandP00590

Ligands and binding sites

  • DFP · Diisopropyl phosphonate · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
14460.680.7951DFP

Interfaces

1 interface between chains.

  • A–B · 187 Ų buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 disulfide, 2 covalent (disulfide, covalent ligand).

Compared structures

  • 1XZK · Fusarium solani cutinase complex with DI(ISOPROPYL)PHOSPHATE · the same entry in another collection · chain A against A, TM-score 1.00
  • P00590 · AlphaFold monomer V2.0 prediction for cutinase 1 (P00590) · a predicted model of the same protein · chain A against A, TM-score 1.00

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