MolNFT v1 · #27385 · protein

Molybdenum cofactor biosynthesis protein from pyrococcus furiosus pfu- 1657500-001

1XI8: “Molybdenum cofactor biosynthesis protein from pyrococcus furiosus pfu- 1657500-001”. X-ray diffraction, 4 pockets (best druggability 0.81). MolNFT v1 #27385 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1XI8
Type: protein
Length: 534 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Molybdenum cofactor biosynthesis protein
UniProt: Q8U034
Pockets: 4 · best druggability 0.81

Structure

x-ray diffraction · 2 distinct chains · 27% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Molybdenum cofactor biosynthesis protein	protein	269	27% helix, 30% strand	Q8U034
B	Molybdenum cofactor biosynthesis protein	protein	265	27% helix, 33% strand	Q8U034

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1068	0.81	0.82	92	empty
2	110	0.40	0.76	19	empty
3	96	0.40	0.76	17	empty
4	59	0.33	0.76	12	empty

Interfaces

1 interface between chains.

A–B · 1717 Å² buried · 16 hydrogen bonds · protein-protein

Compared structures

1XI8 · Molybdenum cofactor biosynthesis protein from Pyrococcus furiosus Pfu-1657500-001 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8U034
Elsewhere: RCSB PDB 1XI8 · PDBe 1XI8 · UniProt Q8U034

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.