MolNFT v1 · #26802 · protein + DNA
Complex structure of the C-terminal RNA-binding domain of hnrnp D(AUF1) with telomeric DNA
1X0F · 5'-D(P*TP*AP*GP*G)-3': “Complex structure of the C-terminal RNA-binding domain of hnrnp D(AUF1) with telomeric DNA”. Solution nmr. MolNFT v1 #26802 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1X0F
- Type
- protein + DNA
- Length
- 83 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(P*TP*AP*GP*G)-3'; Heterogeneous nuclear ribonucleoprotein D0
- UniProt
- Q14103
Structure
solution nmr · 2 distinct chains · 22% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | 5'-D(P*TP*AP*GP*G)-3' | dna | 4 | — | — |
| A | Heterogeneous nuclear ribonucleoprotein D0 | protein | 79 | 22% helix, 25% strand | Q14103 |
Interfaces
1 interface between chains.
- B–A · 544 Ų buried · 10 hydrogen bonds · protein-nucleic
Compared structures
- 1X0F · Complex structure of the C-terminal RNA-binding domain of hnRNP D(AUF1) with telomeric DNA · the same entry in another collection · chain B against B, TM-score 1.00
- Q14103 · AlphaFold monomer V2.0 prediction for heterogeneous nuclear ribonucleoprotein D0 (Q14103) · a predicted model of the same protein · chain A against A, TM-score 0.80
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q14103
- Elsewhere: RCSB PDB 1X0F · PDBe 1X0F · UniProt Q14103
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