MolNFT v1 · #26718 · protein
Crystal structure of GTP binding protein from pyrococcus horikoshii OT3
1WXQ · GTP-binding protein: “Crystal structure of GTP binding protein from pyrococcus horikoshii OT3”. X-ray diffraction, 5 pockets (best druggability 0.44). MolNFT v1 #26718 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1WXQ
- Type
- protein
- Length
- 344 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- GTP-binding protein
- UniProt
- O58261
- Pockets
- 5 · best druggability 0.44
Structure
x-ray diffraction · 1 distinct chain · 37% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | GTP-binding protein | protein | 344 | 37% helix, 21% strand | O58261 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 109 | 0.44 | 0.77 | 19 | empty |
| 2 | 112 | 0.41 | 0.76 | 16 | empty |
| 3 | 134 | 0.36 | 0.72 | 20 | empty |
| 4 | 70 | 0.33 | 0.75 | 17 | empty |
| 5 | 52 | 0.26 | 0.73 | 11 | empty |
Modifications
Observed in the structure: 7 modified (engineered).
Compared structures
- 1WXQ · Crystal Structure of GTP binding protein from Pyrococcus horikoshii OT3 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58261
- Elsewhere: RCSB PDB 1WXQ · PDBe 1WXQ · UniProt O58261
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