MolNFT v1 · #26606 · protein

Crystal structure of protein GI:16801725, member of enolase superfamily from listeria innocua CLIP11262

1WUF · Hypothetical protein LIN2664: “Crystal structure of protein GI:16801725, member of enolase superfamily from listeria innocua CLIP11262”. X-ray diffraction, 1 ligand (MG), 3 pockets (best druggability 0.83). MolNFT v1 #26606 on…

PDB: 1WUF
Type: protein
Length: 742 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein LIN2664
UniProt: Q927X3
Ligands: MG
Pockets: 3 · best druggability 0.83

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 25% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Hypothetical protein LIN2664	protein	371	35% helix, 25% strand	Q927X3

Ligands and binding sites

MG · Magnesium ion · metal · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	983	0.83	0.84	92	MG
2	446	0.76	0.84	41	empty
3	269	0.56	0.77	33	empty

Interfaces

1 interface between chains.

A–B · 1350 Å² buried · 20 hydrogen bonds · protein-protein

Compared structures

1WUF · Crystal structure of protein GI:16801725, member of Enolase superfamily from Listeria… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q927X3
Elsewhere: RCSB PDB 1WUF · PDBe 1WUF · UniProt Q927X3

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