MolNFT v1 · #26372 · protein
Crystal structure of project id PH1539 from pyrococcus horikoshii OT3
1WN2 · Peptidyl-tRNA hydrolase: “Crystal structure of project id PH1539 from pyrococcus horikoshii OT3”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #26372 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1WN2
- Type
- protein
- Length
- 118 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptidyl-tRNA hydrolase
- EC
- 3.1.1.29
- UniProt
- O74017
- Ligands
- NA
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-tRNA hydrolase (EC 3.1.1.29) | protein | 118 | 44% helix, 26% strand | O74017 |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1WN2 · Crystal structure of project ID PH1539 from Pyrococcus horikoshii OT3 · the same entry in another collection · chain A against A, TM-score 1.00
- O74017 · AlphaFold monomer V2.0 prediction for peptidyl-tRNA hydrolase (O74017) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O74017
- Elsewhere: RCSB PDB 1WN2 · PDBe 1WN2 · UniProt O74017
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