MolNFT v1 · #26353 · protein
Crystal structure of archaeal rele-relb complex from pyrococcus horikoshii OT3
1WMI · Hypothetical protein PHS013: “Crystal structure of archaeal rele-relb complex from pyrococcus horikoshii OT3”. X-ray diffraction, 2 pockets (best druggability 0.73). MolNFT v1 #26353 on GenesisL1: 3D structure, binding sites and…
- PDB
- 1WMI
- Type
- protein
- Length
- 298 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hypothetical protein PHS013; Hypothetical protein PHS014
- UniProt
- O73966, O73967
- Pockets
- 2 · best druggability 0.73
Structure
x-ray diffraction · 2 distinct chains · 41% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | Hypothetical protein PHS013 | protein | 88 | 28% helix, 35% strand | O73966 |
| B, D | Hypothetical protein PHS014 | protein | 61 | 59% helix, 7% strand | O73967 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 333 | 0.73 | 0.85 | 39 | empty |
| 2 | 57 | 0.28 | 0.74 | 12 | empty |
Interfaces
6 interfaces between chains.
- C–D · 2086 Ų buried · 37 hydrogen bonds · protein-protein
- A–B · 2063 Ų buried · 39 hydrogen bonds · protein-protein
- A–C · 355 Ų buried · 7 hydrogen bonds · protein-protein
- A–D · 259 Ų buried · 5 hydrogen bonds · protein-protein
- B–C · 234 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 1WMI · Crystal structure of archaeal RelE-RelB complex from Pyrococcus horikoshii OT3 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O73966
- Every structure of UniProt O73967
- Elsewhere: RCSB PDB 1WMI · PDBe 1WMI · UniProt O73966 · UniProt O73967
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