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MolNFT v1 · #2598 · protein

Crystal structure of bacillus subtilis ferrochelatase in complex with N-methyl mesoporphyrin

1C1H: “Crystal structure of bacillus subtilis ferrochelatase in complex with N-methyl mesoporphyrin”. X-ray diffraction, 2 ligands (MMP, MG), 1 pocket (best druggability 0.75). MolNFT v1 #2598 on GenesisL1: 3D structure, binding sites and…

PDB
1C1H
Type
protein
Length
306 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ferrochelatase
EC
4.99.1.1
UniProt
P32396
Ligands
MMP, MG
Pockets
1 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 51% helix, 16% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AFerrochelatase (EC 4.99.1.1)protein30651% helix, 16% strandP32396

Ligands and binding sites

  • MMP · N-methylmesoporphyrin · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
15830.750.8254MG, MMP

Compared structures

  • 1C1H · Crystal structure of bacillus subtilis ferrochelatase in complex with N-methyl… · the same entry in another collection · chain A against A, TM-score 1.00
  • P32396 · AlphaFold monomer V2.0 prediction for coproporphyrin III ferrochelatase (P32396) · a predicted model of the same protein · chain A against A, TM-score 0.99

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