MolNFT v1 · #25959 · protein

Recombinant human purple acid phosphatase expressed in pichia pastoris

1WAR: “Recombinant human purple acid phosphatase expressed in pichia pastoris”. X-ray diffraction, 3 ligands (NAG, FE, PO4), 1 pocket (best druggability 0.26). MolNFT v1 #25959 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1WAR
Type: protein
Length: 310 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Human purple acid phosphatase
EC: 3.1.3.2
UniProt: Q6IAS6
Ligands: NAG, FE, PO4
Pockets: 1 · best druggability 0.26

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Human purple acid phosphatase (EC 3.1.3.2)	protein	310	24% helix, 24% strand	Q6IAS6

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
FE · Fe (III) ion · metal · 2 copies · chains A
PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.26	0.74	13	empty

Modifications

Observed in the structure: 1 disulfide, 1 glycan (disulfide, N-glycosylation).

Compared structures

1WAR · Recombinant Human Purple Acid Phosphatase expressed in Pichia Pastoris · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6IAS6
Elsewhere: RCSB PDB 1WAR · PDBe 1WAR · UniProt Q6IAS6

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