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MolNFT v1 · #25927 · protein

Structure of a beta-1,3-glucan binding CBM6 from bacillus halodurans

1W9S · BH0236 protein: “Structure of a beta-1,3-glucan binding CBM6 from bacillus halodurans”. X-ray diffraction, 1 ligand (NA), 1 pocket (best druggability 0.26). MolNFT v1 #25927 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
1W9S
Type
protein
Length
268 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
BH0236 protein
UniProt
Q9KG76
Ligands
NA
Pockets
1 · best druggability 0.26

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 59% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BBH0236 proteinprotein1340% helix, 59% strandQ9KG76

Ligands and binding sites

  • NA · Sodium ion · metal · 6 copies · chains A, B
  • GOL · Glycerol · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1600.260.7317empty

Interfaces

1 interface between chains.

  • A–B · 346 Ų buried · 10 hydrogen bonds · protein-protein

Compared structures

  • 1W9S · Structure of a beta-1,3-glucan binding CBM6 from Bacillus halodurans · the same entry in another collection · chain A against A, TM-score 1.00

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