MolNFT v1 · #25496 · protein + RNA
Structure of the U2 strain of tobacco mosaic virus refined at 3.5 ångströms resolution using X-ray fiber diffraction
1VTM · RNA (5'-R(P*GP*AP*A)-3'): “Structure of the U2 strain of tobacco mosaic virus refined at 3.5 ångströms resolution using X-ray fiber…”. Fiber diffraction. MolNFT v1 #25496 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1VTM
- Type
- protein + RNA
- Length
- 161 residues
- Chains
- 2
- Method
- fiber diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(P*GP*AP*A)-3'); Coat protein
- UniProt
- P03579
Structure
fiber diffraction · 2 distinct chains · 37% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| R | RNA (5'-R(P*GP*AP*A)-3') | rna | 3 | — | — |
| P | Coat protein | protein | 158 | 37% helix, 6% strand | P03579 |
Interfaces
1 interface between chains.
- R–P · 365 Ų buried · 11 hydrogen bonds · protein-nucleic
Compared structures
- 1VTM · Structure of the U2 strain of tobacco mosaic virus refined at 3.5 ångströms resolution… · the same entry in another collection · chain R against R, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03579
- Elsewhere: RCSB PDB 1VTM · PDBe 1VTM · UniProt P03579
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