MolNFT v1 · #25308 · protein

Ligand binding domain of the wild-type aspartate receptor

1VLS: “Ligand binding domain of the wild-type aspartate receptor”. X-ray diffraction, 1 pocket (best druggability 0.34). MolNFT v1 #25308 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1VLS
Type: protein
Length: 146 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Aspartate receptor
UniProt: P02941
Pockets: 1 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 81% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Aspartate receptor	protein	146	81% helix, 0% strand	P02941

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	60	0.34	0.77	15	empty

Compared structures

1VLS · Ligand binding domain of the wild-type aspartate receptor · the same entry in another collection · chain A against A, TM-score 1.00
P02941 · AlphaFold monomer V2.0 prediction for methyl-accepting chemotaxis protein II (P02941) · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02941
Elsewhere: RCSB PDB 1VLS · PDBe 1VLS · UniProt P02941

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