MolNFT v1 · #25231 · protein
Crystal structure of a putative DNA-binding protein (CC_0111) from caulobacter crescentus CB15 at 1.62 a resolution
1VJF · DNA-binding protein, putative: “Crystal structure of a putative DNA-binding protein (CC_0111) from caulobacter crescentus CB15 at 1.62 a…”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.51). MolNFT v1 #25231 on…
- PDB
- 1VJF
- Type
- protein
- Length
- 167 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA-binding protein, putative
- UniProt
- Q9ABV9
- Ligands
- CL
- Pockets
- 1 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding protein, putative | protein | 167 | 32% helix, 26% strand | Q9ABV9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 187 | 0.51 | 0.77 | 19 | GOL |
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 1VJF · Crystal structure of a putative DNA-binding protein (CC_0111) from caulobacter crescentus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ABV9
- Elsewhere: RCSB PDB 1VJF · PDBe 1VJF · UniProt Q9ABV9
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