MolNFT v1 · #25170 · protein
Crystal structure of a putative flavin oxidoreductase with flavin
1VHN: “Crystal structure of a putative flavin oxidoreductase with flavin”. X-ray diffraction, 2 ligands (FMN, SO4), 2 pockets (best druggability 0.64). MolNFT v1 #25170 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1VHN
- Type
- protein
- Length
- 305 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative flavin oxidoreductase
- UniProt
- Q9WXV1
- Ligands
- FMN, SO4
- Pockets
- 2 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative flavin oxidoreductase | protein | 305 | 49% helix, 13% strand | Q9WXV1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 187 | 0.64 | 0.84 | 29 | SO4, FMN |
| 2 | 57 | 0.33 | 0.77 | 11 | empty |
Modifications
Observed in the structure: 6 modified (engineered).
Compared structures
- 1VHN · Crystal structure of a putative flavin oxidoreductase with flavin · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9WXV1
- Elsewhere: RCSB PDB 1VHN · PDBe 1VHN · UniProt Q9WXV1
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