MolNFT v1 · #25137 · protein
Crystal structure of an isozyme of citrate synthase from sulfolbus tokodaii STRAIN7
1VGP · 373AA long hypothetical citrate synthase: “Crystal structure of an isozyme of citrate synthase from sulfolbus tokodaii STRAIN7”. X-ray diffraction, 4 pockets (best druggability 0.52). MolNFT v1 #25137 on GenesisL1: 3D structure…
- PDB
- 1VGP
- Type
- protein
- Length
- 373 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 373AA long hypothetical citrate synthase
- EC
- 2.3.3.1, 4.1.3.7
- UniProt
- Q974S5
- Pockets
- 4 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 373AA long hypothetical citrate synthase (EC 2.3.3.1, 4.1.3.7) | protein | 373 | 58% helix, 3% strand | Q974S5 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 263 | 0.52 | 0.75 | 23 | empty |
| 2 | 133 | 0.50 | 0.80 | 27 | empty |
| 3 | 70 | 0.35 | 0.77 | 16 | empty |
| 4 | 75 | 0.32 | 0.74 | 19 | empty |
Compared structures
- 1VGP · Crystal Structure of an Isozyme of Citrate Synthase from Sulfolbus tokodaii strain7 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q974S5
- Elsewhere: RCSB PDB 1VGP · PDBe 1VGP · UniProt Q974S5
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