MolNFT v1 · #24912 · protein
Solution structure of transcription factor SP1 DNA binding domain (zinc finger 2)
1VA2: “Solution structure of transcription factor SP1 DNA binding domain (zinc finger 2)”. Solution nmr, 1 ligand (ZN). MolNFT v1 #24912 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1VA2
- Type
- protein
- Length
- 31 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcription factor SP1
- UniProt
- P08047
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 26% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription factor SP1 | protein | 31 | 26% helix, 13% strand | P08047 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1VA2 · Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 2) · the same entry in another collection · chain A against A, TM-score 1.00
- P08047 · AlphaFold monomer V2.0 prediction for transcription factor SP1 (P08047) · a predicted model of the same protein · chain A against A, TM-score 0.60
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08047
- Elsewhere: RCSB PDB 1VA2 · PDBe 1VA2 · UniProt P08047
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