MolNFT v1 · #24374 · protein
Structure of the conserved domain of anac, a member of the nac family of transcription factors
1UT7 · No apical meristem protein: “Structure of the conserved domain of anac, a member of the nac family of transcription factors”. X-ray diffraction, 1 ligand (AU), 5 pockets (best druggability 0.45). MolNFT v1 #24374 on GenesisL1: 3D…
- PDB
- 1UT7
- Type
- protein
- Length
- 297 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- No apical meristem protein
- UniProt
- Q9C932
- Ligands
- AU
- Pockets
- 5 · best druggability 0.45
Structure
x-ray diffraction · 2 distinct chains · 19% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | No apical meristem protein | protein | 147 | 16% helix, 42% strand | Q9C932 |
| B | No apical meristem protein | protein | 150 | 23% helix, 41% strand | Q9C932 |
Ligands and binding sites
- AU · Gold ion · metal · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 112 | 0.45 | 0.78 | 20 | empty |
| 2 | 75 | 0.44 | 0.80 | 13 | empty |
| 3 | 89 | 0.42 | 0.78 | 19 | AU |
| 4 | 66 | 0.37 | 0.78 | 19 | empty |
| 5 | 61 | 0.32 | 0.76 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 798 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 1UT7 · Structure of the conserved domain of ANAC, a member of the NAC family of transcription… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9C932 · AlphaFold monomer V2.0 prediction for nac domain-containing protein 19 (Q9C932) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9C932
- Elsewhere: RCSB PDB 1UT7 · PDBe 1UT7 · UniProt Q9C932
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